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MINING FUSION PROTEINS & PPI TOKENIZATION ACCURACY ANALYSIS

Section: Mining Fusion Proteins and PPI

TEXT MINING FOR FUSION PROTEINS PROTEIN-PROTEIN INTERACTIONS (PPI) FOR FUSION PROTEINS COMBINATOR

Text Mining for Fusion Proteins and PPI: Quick guide


Text Mining for Fusion Proteins: Web-Form

Searching can be done by:

  1. Uploading a text file: A text file containing the abstract/full text of the article(s) need to be given.
  2. Pasting text in the text box: The contents of the article(s) could be provided in the text box.
  3. Directly from PubMed: ProtFus can be used to extract the fusion proteins and their interactions directly from PubMed.

Text Mining for Fusion Proteins: Input Text Option

Text Mining for Fusion Proteins: Run Text Mining

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Protein-Protein Interactions (PPI) for Fusion Proteins: Web-Form

Protein-Protein Interactions (PPI) for Fusion Proteins: Input Text Option

Protein-Protein Interactions (PPI) for Fusion Proteins: Run PPI Finder

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Combinator: Choose number of articles to be searched from PubMed

Combinator: PubMed Search

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Section: Tokenization

Web-Form

Biological Tokens

Functional Tokens

Literals Tokens

Miscellaneous Tokens

Chunks

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Section: Accuracy Analysis

Precision, Recall, F-Score: Input

Precision, Recall, F-Score: Results

Plot: Input

Plot: Curve

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